Index
Date: 2011-06-15

Overview | Package | Class | Tree | Deprecated | Index | Help
PREV NEXT | FRAMES NO FRAMES

A C D E F G H I J L M N O P R S T V W

## A

add(int, int, double) - Method in class com.pawjaw.linalg.MatrixBuilder
add(double[]) - Method in class com.pawjaw.utils.SortedPairs
allocate() - Method in class com.pawjaw.linalg.Matrix
applyTfIdf() - Method in class com.pawjaw.linalg.Matrix
arg - Variable in class com.pawjaw.utils.OptArg
argOrDefault() - Method in class com.pawjaw.utils.OptArg
asDoubles(int[]) - Static method in class com.pawjaw.linalg.Matrix
avglls - Variable in class com.pawjaw.topics.CGLDA
avglls - Variable in class com.pawjaw.topics.CVHDP

## C

CGLDA - Class in com.pawjaw.topics
CGLDA(Matrix, int, ProgressCallback) - Constructor for class com.pawjaw.topics.CGLDA
CGLDA(Matrix, Matrix, int, double, double, int, int, int, int, ProgressCallback) - Constructor for class com.pawjaw.topics.CGLDA
CGLDA(Matrix, int, double, double, int, int, int, ProgressCallback) - Constructor for class com.pawjaw.topics.CGLDA
CGLDA(Matrix, Matrix, int, double, double[][], int, int, int, int, ProgressCallback) - Constructor for class com.pawjaw.topics.CGLDA
CGLDA(Matrix, int, double, double[][], int, int, int, ProgressCallback) - Constructor for class com.pawjaw.topics.CGLDA
cols - Variable in class com.pawjaw.linalg.Matrix
columnInnerProduct(int, int, double) - Method in class com.pawjaw.linalg.Matrix
columnInnerProductSum(int[], double) - Method in class com.pawjaw.linalg.Matrix
columnOuterProduct(double) - Method in class com.pawjaw.linalg.Matrix
com.pawjaw.linalg - package com.pawjaw.linalg
com.pawjaw.math - package com.pawjaw.math
com.pawjaw.topics - package com.pawjaw.topics
com.pawjaw.utils - package com.pawjaw.utils
combineColumns(List<Matrix>) - Static method in class com.pawjaw.linalg.Matrix
CVHDP - Class in com.pawjaw.topics
CVHDP(Matrix, int, ProgressCallback) - Constructor for class com.pawjaw.topics.CVHDP
CVHDP(Matrix, Matrix, int, int, int, boolean, int, ProgressCallback) - Constructor for class com.pawjaw.topics.CVHDP
CVHDP(Matrix, Matrix, int, int, int, boolean, int, double, double, double, double, double, double, double, double, double, ProgressCallback) - Constructor for class com.pawjaw.topics.CVHDP

## D

data - Variable in class com.pawjaw.utils.OptArg
DEFAULT_A_ALPHA - Static variable in class com.pawjaw.topics.CVHDP
DEFAULT_A_BETA - Static variable in class com.pawjaw.topics.CVHDP
DEFAULT_A_GAMMA - Static variable in class com.pawjaw.topics.CVHDP
DEFAULT_A_TAU - Static variable in class com.pawjaw.topics.CVHDP
DEFAULT_ALPHASUM - Static variable in class com.pawjaw.topics.CGLDA
DEFAULT_B_ALPHA - Static variable in class com.pawjaw.topics.CVHDP
DEFAULT_B_BETA - Static variable in class com.pawjaw.topics.CVHDP
DEFAULT_B_GAMMA - Static variable in class com.pawjaw.topics.CVHDP
DEFAULT_BETA - Static variable in class com.pawjaw.topics.CGLDA
DEFAULT_BURNIN - Static variable in class com.pawjaw.topics.CGLDA
DEFAULT_E_BETA - Static variable in class com.pawjaw.topics.CVHDP
DEFAULT_G_BETA - Static variable in class com.pawjaw.topics.CVHDP
DEFAULT_GROUP_TOKENS_BY_WORD - Static variable in class com.pawjaw.topics.CVHDP
DEFAULT_SAMPLEFREQ - Static variable in class com.pawjaw.topics.CGLDA
DEFAULT_SAMPLES - Static variable in class com.pawjaw.topics.CGLDA
default_value - Variable in class com.pawjaw.utils.OptArg
DEFAULT_VARIATIONAL_ITERATIONS - Static variable in class com.pawjaw.topics.CVHDP
description - Variable in enum com.pawjaw.utils.OptArg.OptType
digamma(double) - Static method in class com.pawjaw.math.SpecFun
digammaInv(double) - Static method in class com.pawjaw.math.SpecFun
dirichletAlphas(double[][]) - Static method in class com.pawjaw.math.SpecFun
dk_k - Variable in class com.pawjaw.topics.CGLDA
dk_k - Variable in class com.pawjaw.topics.CVHDP

## E

E_alpha - Variable in class com.pawjaw.topics.CVHDP
E_beta - Variable in class com.pawjaw.topics.CVHDP
E_gamma - Variable in class com.pawjaw.topics.CVHDP
E_n_k - Variable in class com.pawjaw.topics.CVHDP
E_n_ks - Variable in class com.pawjaw.topics.CVHDP
E_pi_k - Variable in class com.pawjaw.topics.CVHDP
E_tau_w - Variable in class com.pawjaw.topics.CVHDP

## F

first() - Method in class com.pawjaw.utils.SortedPairs

## G

G_alpha - Variable in class com.pawjaw.topics.CVHDP
G_beta - Variable in class com.pawjaw.topics.CVHDP
G_pi_k - Variable in class com.pawjaw.topics.CVHDP
G_tau_w - Variable in class com.pawjaw.topics.CVHDP
get(int) - Method in class com.pawjaw.utils.SortedPairs
getColumns(int[]) - Method in class com.pawjaw.linalg.Matrix
getFileToRead() - Method in class com.pawjaw.utils.OptArg
getFileToWrite() - Method in class com.pawjaw.utils.OptArg
getLowerTriangular(double[][]) - Static method in class com.pawjaw.linalg.Matrix
getLowerTriangularColumnMajor(double[][]) - Static method in class com.pawjaw.linalg.Matrix
getNonZeroColumns() - Method in class com.pawjaw.linalg.Matrix

## H

hasNext() - Method in class com.pawjaw.utils.SortedPairs
help - Variable in class com.pawjaw.utils.OptArg
holdOutFromEachColumn(double) - Method in class com.pawjaw.linalg.Matrix

## I

identifyNonZeroColumns() - Method in class com.pawjaw.linalg.Matrix
increment(int) - Method in class com.pawjaw.utils.SortedPairs
iterator() - Method in class com.pawjaw.utils.SortedPairs

## J

jensenShannonDivergence(int, int) - Method in class com.pawjaw.linalg.Matrix

## L

label() - Method in class com.pawjaw.utils.OptArg
last() - Method in class com.pawjaw.utils.SortedPairs
lnfactorial(long) - Static method in class com.pawjaw.math.SpecFun
lngamma(double) - Static method in class com.pawjaw.math.SpecFun
long_opt - Variable in class com.pawjaw.utils.OptArg
longHelp() - Method in class com.pawjaw.utils.OptArg

## M

main(String[]) - Static method in class com.pawjaw.linalg.Matrix
Main - Class in com.pawjaw.topics
Main(String[]) - Constructor for class com.pawjaw.topics.Main
main(String[]) - Static method in class com.pawjaw.topics.Main
Matrix - Class in com.pawjaw.linalg
Matrix() - Constructor for class com.pawjaw.linalg.Matrix
Matrix(double[][]) - Constructor for class com.pawjaw.linalg.Matrix
Matrix(DataInputStream) - Constructor for class com.pawjaw.linalg.Matrix
Matrix(BufferedReader) - Constructor for class com.pawjaw.linalg.Matrix
Matrix(double[][], boolean) - Constructor for class com.pawjaw.linalg.Matrix
MatrixBuilder - Class in com.pawjaw.linalg
MatrixBuilder(int, int) - Constructor for class com.pawjaw.linalg.MatrixBuilder
multiply(Matrix) - Method in class com.pawjaw.linalg.Matrix

## N

n_k - Variable in class com.pawjaw.topics.CGLDA
n_ks - Variable in class com.pawjaw.topics.CGLDA
next() - Method in class com.pawjaw.utils.SortedPairs
normalizeColumns(double) - Method in class com.pawjaw.linalg.Matrix
notify(int, int) - Method in interface com.pawjaw.utils.ProgressCallback

## O

opt_type - Variable in class com.pawjaw.utils.OptArg
OptArg - Class in com.pawjaw.utils
OptArg(int, OptArg.OptType, String, String, Object, String) - Constructor for class com.pawjaw.utils.OptArg
OptArg(int, OptArg.OptType, String, String, Object, String, Object[]) - Constructor for class com.pawjaw.utils.OptArg
optarg - Variable in exception com.pawjaw.utils.OptArgException
OptArg.OptType - Enum in com.pawjaw.utils
optarg_flag - Static variable in class com.pawjaw.utils.OptArg
OptArgException - Exception in com.pawjaw.utils
OptArgException(String) - Constructor for exception com.pawjaw.utils.OptArgException
OptArgException(String, OptArg) - Constructor for exception com.pawjaw.utils.OptArgException
optargs_applies - Static variable in class com.pawjaw.utils.OptArg

## P

parse(String) - Method in enum com.pawjaw.utils.OptArg.OptType
parseArgs(String[]) - Static method in class com.pawjaw.utils.OptArg
phi_kw - Variable in class com.pawjaw.topics.CGLDA
phi_kw - Variable in class com.pawjaw.topics.CVHDP
pointr - Variable in class com.pawjaw.linalg.Matrix
ProgressCallback - Interface in com.pawjaw.utils

## R

range(int, int, int) - Static method in class com.pawjaw.linalg.Matrix
read(BufferedReader) - Static method in class com.pawjaw.linalg.Matrix
real_bookkeeping_millis - Variable in class com.pawjaw.topics.CVHDP
real_burnin_millis - Variable in class com.pawjaw.topics.CGLDA
real_estimates_millis - Variable in class com.pawjaw.topics.CGLDA
real_hyperparameter_update_millis - Variable in class com.pawjaw.topics.CVHDP
real_variational_posterior_update_millis - Variable in class com.pawjaw.topics.CVHDP
remove() - Method in class com.pawjaw.utils.SortedPairs
reset() - Method in class com.pawjaw.utils.SortedPairs
rowind - Variable in class com.pawjaw.linalg.Matrix
rows - Variable in class com.pawjaw.linalg.Matrix

## S

selectRowsByNIdf(double, double) - Method in class com.pawjaw.linalg.Matrix
set(int, int, double) - Method in class com.pawjaw.linalg.MatrixBuilder
short_opt - Variable in class com.pawjaw.utils.OptArg
size() - Method in class com.pawjaw.utils.SortedPairs
sortAscending() - Method in class com.pawjaw.utils.SortedPairs
sortDescending() - Method in class com.pawjaw.utils.SortedPairs
SortedPairs - Class in com.pawjaw.utils
SortedPairs(int) - Constructor for class com.pawjaw.utils.SortedPairs
SpecFun - Class in com.pawjaw.math
SpecFun() - Constructor for class com.pawjaw.math.SpecFun

## T

tetragamma(double) - Static method in class com.pawjaw.math.SpecFun
theta_dk - Variable in class com.pawjaw.topics.CGLDA
theta_dk - Variable in class com.pawjaw.topics.CVHDP
timing - Variable in class com.pawjaw.topics.CGLDA
timing - Variable in class com.pawjaw.topics.CVHDP
toArray() - Method in class com.pawjaw.linalg.Matrix
toArray(Collection<Integer>) - Static method in class com.pawjaw.linalg.Matrix
toArray(Collection<Double>) - Static method in class com.pawjaw.linalg.Matrix
toColumnMajor() - Method in class com.pawjaw.linalg.Matrix
toColumnMajor(double[][]) - Static method in class com.pawjaw.linalg.Matrix
toCopy() - Method in class com.pawjaw.linalg.Matrix
toList(int[]) - Static method in class com.pawjaw.linalg.Matrix
toList(double[]) - Static method in class com.pawjaw.linalg.Matrix
toMatrix(Matrix) - Method in class com.pawjaw.linalg.MatrixBuilder
toMatrix() - Method in class com.pawjaw.linalg.MatrixBuilder
toString() - Method in class com.pawjaw.linalg.Matrix
toString() - Method in class com.pawjaw.utils.OptArg
toSummary() - Method in class com.pawjaw.linalg.Matrix
toSummary() - Method in class com.pawjaw.linalg.MatrixBuilder
toTranspose() - Method in class com.pawjaw.linalg.Matrix
trigamma(double) - Static method in class com.pawjaw.math.SpecFun

## V

vals - Variable in class com.pawjaw.linalg.Matrix
value - Variable in class com.pawjaw.linalg.Matrix
value_idxpair - Variable in class com.pawjaw.linalg.MatrixBuilder
valueOf(String) - Static method in enum com.pawjaw.utils.OptArg.OptType
  Returns the enum constant of this type with the specified name.
values() - Static method in enum com.pawjaw.utils.OptArg.OptType
  Returns an array containing the constants of this enum type, in the order they are declared.

## W

write(DataOutputStream) - Method in class com.pawjaw.linalg.Matrix
write(PrintWriter) - Method in class com.pawjaw.linalg.Matrix
write(double[][], PrintWriter) - Static method in class com.pawjaw.linalg.Matrix

A C D E F G H I J L M N O P R S T V W

Overview | Package | Class | Tree | Deprecated | Index | Help
PREV NEXT | FRAMES NO FRAMES